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1.
Arch Biochem Biophys ; 694: 108603, 2020 11 15.
Artigo em Inglês | MEDLINE | ID: mdl-32986977

RESUMO

The alternative oxidase (AOX) catalyzes the transfer of electrons from ubiquinol to oxygen without the translocation of protons across the inner mitochondrial membrane. This enzyme has been proposed to participate in the regulation of cell growth, sporulation, yeast-mycelium transition, resistance to reactive oxygen species, infection, and production of secondary metabolites. Two approaches have been used to evaluate AOX function: incubation of cells for long periods of time with AOX inhibitors or deletion of AOX gene. However, AOX inhibitors might have different targets. To test non-specific effects of n-octyl gallate (nOg) and salicylhydroxamic acid (SHAM) on fungal physiology we measured the growth and respiratory capacity of two fungal strains lacking (Ustilago maydis-Δaox and Saccharomyces cerevisiae) and three species containing the AOX gene (U. maydis WT, Debaryomyces hansenii, and Aspergillus nidulans). For U. maydis, a strong inhibition of growth and respiratory capacity by SHAM was observed, regardless of the presence of AOX. Similarly, A. nidulans mycelial growth was inhibited by low concentrations of nOg independently of AOX expression. In contrast, these inhibitors had no effect or had a minor effect on S. cerevisiae and D. hansenii growth. These results show that nOg and SHAM have AOX independent effects which vary in different microorganisms, indicating that studies based on long-term incubation of cells with these inhibitors should be considered as inconclusive.


Assuntos
Inibidores Enzimáticos/farmacologia , Proteínas Fúngicas/antagonistas & inibidores , Fungos/efeitos dos fármacos , Ácido Gálico/análogos & derivados , Oxirredutases/antagonistas & inibidores , Salicilamidas/farmacologia , Processos de Crescimento Celular/efeitos dos fármacos , Fungos/crescimento & desenvolvimento , Fungos/metabolismo , Ácido Gálico/farmacologia , Mitocôndrias/efeitos dos fármacos , Mitocôndrias/metabolismo , Proteínas Mitocondriais/antagonistas & inibidores , Oxigênio/metabolismo
2.
J Food Sci ; 84(10): 2944-2954, 2019 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-31553057

RESUMO

The objective of this study was to isolate and identify the microorganisms, especially yeasts and molds, related to the improvement of beef quality during dry-aging of beef through microbiome analysis, and to examine the possibility of using them as starter culture strains to improve the efficiency of dry-aging beef production. Beef sirloins were dry-aged for 28 days using different wind speeds (0, 2.5, and 5 m/s) at 1 to 3 °C and 75% relative humidity, and microbial compositions were confirmed by microbiome analysis. Mold and yeast samples were plated on potato dextrose agar supplemented with 10% tartaric acid, and the isolated colonies were identified by DNA sequencing. The isolates were subjected to microbial characterization (morphological characterization, growth condition, and enzyme activity). Microbiome analysis showed that the dominant microorganisms were molds and yeasts identified as Pilaira anomala SMFM201611 and Debaryomyces hansenii SMFM201707. Pilaira anomala SMFM201611 and D. hansenii SMFM201707 were inoculated into 24 sirloins of the lowest grade. All samples were dry-aged for 0, 14, 21, and 28 days and analyzed for microbial growth, pH, shear force, ultrastructure, and flavor compounds (free amino acids and free fatty acids). Inoculation with P. anomala SMFM201611 and D. hansenii SMFM201707 improved tenderness and cause the breakdown of myofibrils by proteolysis. Both microorganisms also produced free amino acids and fatty acids through proteolytic and lipolytic activities. These results indicate that P. anomala SMFM201611 and D. hansenii SMFM201707 isolated and identified from dry-aged beef can improve the quality of low-grade beef during dry-aging. PRACTICAL APPLICATION: During dry-aging, mold and yeast improve the quality of dry-aged beef. Pilaira anomala SMFM201611 and Debaryomyces hansenii SMFM201707 isolated from dry-aged beef can improve tenderness by breaking down myofibrils. Both microorganisms improve flavor by producing free fatty acids and amino acids, and the taste and aroma characteristics of low-grade beef may be improved during the dry-aging process.


Assuntos
Fungos/isolamento & purificação , Microbiota , Carne Vermelha/microbiologia , Leveduras/isolamento & purificação , Animais , Bovinos , Aromatizantes/análise , Microbiologia de Alimentos , Fungos/classificação , Fungos/genética , Fungos/crescimento & desenvolvimento , Humanos , Produtos da Carne/análise , Odorantes/análise , Melhoria de Qualidade , Carne Vermelha/análise , Análise de Sequência de DNA , Paladar , Leveduras/classificação , Leveduras/genética , Leveduras/crescimento & desenvolvimento
3.
Fungal Biol ; 123(7): 507-516, 2019 07.
Artigo em Inglês | MEDLINE | ID: mdl-31196520

RESUMO

In the present study, we surveyed the distribution and diversity of fungal assemblages associated with 10 species of marine animals from Antarctica. The collections yielded 83 taxa from 27 distinct genera, which were identified using molecular biology methods. The most abundant taxa were Cladosporium sp. 1, Debaryomyces hansenii, Glaciozyma martinii, Metschnikowia australis, Pseudogymnoascus destructans, Thelebolus cf. globosus, Pseudogymnoascus pannorum, Tolypocladium tundrense, Metschnikowia australis, and different Penicillium species. The diversity, richness, and dominance of fungal assemblages ranged among the host; however, in general, the fungal community, which was composed of endemic and cold-adapted cosmopolitan taxa distributed across the different sites of Antarctic Peninsula, displayed high diversity, richness, and dominance indices. Our results contribute to knowledge about fungal diversity in the marine environment across the Antarctic Peninsula and their phylogenetic relationships with species that occur in other cold, temperate, and tropical regions of the World. Additionally, despite their extreme habitats, marine Antarctic animals shelter cryptic and complex fungal assemblages represented by endemic and cosmopolitan cold-adapted taxa, which may represent interesting models to study different symbiotic associations between fungi and their animal hosts in the extreme conditions of Antarctica.


Assuntos
Organismos Aquáticos/microbiologia , Biodiversidade , Fungos/classificação , Fungos/crescimento & desenvolvimento , Micobioma/fisiologia , Filogenia , Animais , Regiões Antárticas , Extremófilos/classificação , Extremófilos/genética , Extremófilos/crescimento & desenvolvimento , Extremófilos/isolamento & purificação , Fungos/genética , Fungos/isolamento & purificação
4.
Meat Sci ; 153: 152-158, 2019 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-30953880

RESUMO

Beef rumps (middle gluteal) were dry aged for 28 days using different air flow velocities of 0, 2.5, and 5 m/s (DA0, DA2.5, and DA5, respectively). The microbial composition, physicochemical traits (moisture, pH, and shear force), flavor compounds (inosine 5'-monophosphate, reducing sugar, free amino acid, and free fatty acid), and electronic tongue profile were analyzed at day 0, 14, and 28. No molds or yeasts were detected until day 14. On day 28, Pilaira anomala was found to be the most abundant in DA0, whereas DA2.5 and DA5 showed increased composition of Debaryomyces hansenii. With that, the significant changes in physicochemical traits and flavor compounds occurred. In addition, the pattern of flavor compounds and taste attributes from DA0, which had different mold and yeast compositions, were discriminable from DA2.5 and DA5. Therefore, our results suggest that air flow can affect microbial composition on the crust, possibly resulting in different sensory properties of dry-aged beef.


Assuntos
Movimentos do Ar , Manipulação de Alimentos/métodos , Carne Vermelha/microbiologia , Animais , Bactérias/crescimento & desenvolvimento , Bovinos , Aromatizantes , Microbiologia de Alimentos , Fungos/crescimento & desenvolvimento , Concentração de Íons de Hidrogênio , Resistência ao Cisalhamento , Paladar , Leveduras/crescimento & desenvolvimento
5.
Int J Food Microbiol ; 265: 40-48, 2018 Jan 16.
Artigo em Inglês | MEDLINE | ID: mdl-29127809

RESUMO

The design of novel efficient antimicrobial peptides (AMPs) faces several issues, such as cost of synthesis, proteolytic stability or cytotoxicity. The identification of key determinants involved in the activity of AMPs, such as cationicity and amphipathicity, allowed the synthesis of short peptides with optimized properties. An ultrashort peptide made of the sequence H-Orn-Orn-Trp-Trp-NH2 (O3TR) showed antifungal activity against several contaminants from food products. This peptide inhibited the growth of the filamentous fungi Fusarium culmorum, Penicillium expansum and Aspergillus niger within a range of concentration of 12.5-50µg/ml. In addition, O3TR inhibited the growth of the yeast Saccharomyces cerevisiae, Zygosaccharomyces bailii, Zygosaccharomyces rouxii, Debaryomyces hansenii and Kluyveromyces lactis within the range 12.5-50µg/ml. A derivative peptide, called C12O3TR, made by the addition of lauric acid at the N-terminus of O3TR was 2- to 8-fold more active than O3TR against every species. In addition to the inhibition of conidial germination, O3TR and C12O3TR killed F. culmorum hyphae at 100 and 50µg/ml respectively. The MIC of the two peptides against F. culmorum and Z. bailii after heat treatment at 100°C for 60 min and within the pH range 3-10, were not changed. However, the activity of O3TR against F.culmorum and Z. bailii was strongly reduced in salt solutions, whereas the lauric acid peptide kept its antifungal activity and resistance to proteolytic digestion. The conjugation with lauric acid reduced the random coiled structure and increased the α-helical content of O3TR. After conjugation with the dye tetramethylrhodamine (TMR), both peptides entered F. culmorum spores. They also both induced permeabilization of F. culmorum hyphae but only C12O3TR permeabilized Z. bailii membrane. In contrast to the lipopeptide, O3TR did not show haemolytic or cytotoxic activity when applied at the concentrations that exhibited antifungal potency. The two peptides were challenged against a yeast cocktail of S. cerevisiae and Z. bailii, and A. niger in different commercial beverages. After 7 days, O3TR was able to inhibit the yeast cocktail in a commercial lager and carbonated drink. Due to its antifungal potency, high stability and low cytotoxicity, the tetrapeptide could represent a promising starting point of a novel food preservative.


Assuntos
Antifúngicos/farmacologia , Dipeptídeos/farmacologia , Contaminação de Alimentos/prevenção & controle , Conservantes de Alimentos/farmacologia , Fungos/crescimento & desenvolvimento , Oligopeptídeos/farmacologia , Aspergillus niger/crescimento & desenvolvimento , Dipeptídeos/química , Microbiologia de Alimentos , Fusarium/crescimento & desenvolvimento , Kluyveromyces/crescimento & desenvolvimento , Testes de Sensibilidade Microbiana , Oligopeptídeos/química , Penicillium/crescimento & desenvolvimento , Saccharomyces cerevisiae/crescimento & desenvolvimento , Esporos Fúngicos/crescimento & desenvolvimento , Zygosaccharomyces/crescimento & desenvolvimento
6.
Int J Food Microbiol ; 241: 298-307, 2017 Jan 16.
Artigo em Inglês | MEDLINE | ID: mdl-27835773

RESUMO

The microbiota of Serrano dry-cured ham of different chemical composition, subjected or not to high-pressure processing (HPP), was investigated using culture-dependent and culture-independent methods. Microbial counts were submitted to analysis of variance with physicochemical parameters (aw, NaCl concentration, salt-in-lean ratio and intramuscular fat content) or HPP as main effects. In untreated hams, physicochemical parameters significantly affected counts of aerobic mesophiles, psychrotrophs, and moulds and yeasts. NaCl concentration and fat content influenced the levels of four and three of the five studied microbial groups, respectively, whereas no influence of aw was stated. The HPP treatment had a significant effect on counts of all investigated microbial groups. Culture-independent methods showed the presence of bacteria such as Staphylococcus equorum, Staphylococcus succinus, Bacillus subtilis and Cellulosimicrobium sp., moulds like Penicillium commune, Aspergillus fumigatus, Sclerotinia sclerotiorum, Eurotium athecium and Moniliella mellis, and yeasts like Debaryomyces hansenii and Candida glucosophila. Absence of B. subtilis bands and weaker bands of E. athecium were recorded for HPP-treated hams. The higher microbial levels found in lean ham might result in a quicker deterioration. HPP treatment confirmed its suitability as a procedure to control spoilage microorganisms. DGGE did not seem to be sensitive enough to highlight changes caused by HPP treatment in the microbiota of ham, but contributed to the detection of microbial species not previously found in ham.


Assuntos
Bactérias/isolamento & purificação , Conservação de Alimentos/métodos , Fungos/isolamento & purificação , Produtos da Carne/microbiologia , Microbiota , Animais , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Manipulação de Alimentos , Conservação de Alimentos/instrumentação , Fungos/genética , Fungos/crescimento & desenvolvimento , Produtos da Carne/análise , Pressão , Cloreto de Sódio/análise , Suínos
7.
Med Mycol ; 53(4): 378-86, 2015 May.
Artigo em Inglês | MEDLINE | ID: mdl-25724203

RESUMO

The murine model of Jorge Lobo's disease is characterized by histological alterations similar to those seen in human disease, including a large number of viable fungi. This study evaluated the immune response of mice with early and late macroscopic lesions (5 and 13 months post-inoculation [p.i.], respectively) by the analysis of peritoneal lavage cells and footpad (FP) histology. The FP of mice were inoculated with 1 × 10(6) fungi (viability index of 41%). At 5 and 13 months p.i., the granuloma mainly consisted of macrophages and multinucleated giant cells, but a larger number of neutrophils was observed at 5 months and lymphocytes at 13 months. The number of fungi in the FP and fungal viability were 1.8 ± 1.1 × 10(6) fungi/ml and 38.5% at 5 months p.i. and 30.8 ± 11.7 × 10(6) fungi/ml and 9% at 13 months (P < .05). Higher production of H2O2, O2(-), IL-10, and TNF-α were observed at 13 months (P < .05), but there was no significant difference in the production of NO, IL-2, IL-4, IL-12 and IFN-γ. The results showed significant differences between early and late lesions and support the use of BALB/c mice for evaluation of the different phases of infection.


Assuntos
Técnicas Citológicas , Modelos Animais de Doenças , Pé/patologia , Histocitoquímica , Lobomicose/patologia , Lavagem Peritoneal , Animais , Citocinas/metabolismo , Feminino , Seguimentos , Fungos/crescimento & desenvolvimento , Granuloma/patologia , Leucócitos/imunologia , Camundongos Endogâmicos BALB C , Óxido Nítrico/metabolismo
8.
FEMS Microbiol Lett ; 362(1): 1-9, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25790503

RESUMO

Microbial communities living on cheese surfaces are composed of various bacteria, yeasts and molds that interact together, thus generating the typical sensory properties of a cheese. Physiological and genomic investigations have revealed important functions involved in the ability of microorganisms to establish themselves at the cheese surface. These functions include the ability to use the cheese's main energy sources, to acquire iron, to tolerate low pH at the beginning of ripening and to adapt to high salt concentrations and moisture levels. Horizontal gene transfer events involved in the adaptation to the cheese habitat have been described, both for bacteria and fungi. In the future, in situ microbial gene expression profiling and identification of genes that contribute to strain fitness by massive sequencing of transposon libraries will help us to better understand how cheese surface communities function.


Assuntos
Bactérias/crescimento & desenvolvimento , Biota , Queijo/microbiologia , Fungos/crescimento & desenvolvimento , Adaptação Biológica , Adaptação Fisiológica , Bactérias/genética , Bactérias/metabolismo , Metabolismo Energético , Fungos/genética , Fungos/metabolismo , Transferência Genética Horizontal , Concentração de Íons de Hidrogênio , Ferro/metabolismo , Salinidade
9.
Oxford; s.n; 2015. 9 p. ilus.
Não convencional em Inglês | SES-SP, SESSP-ILSLPROD, SES-SP, SESSP-ILSLACERVO, SES-SP | ID: biblio-1085511

RESUMO

The murine model of Jorge Lobo's disease is characterized by histological alterations similar to those seen in human disease, including a large number of viable fungi. This study evaluated the immune response of mice with early and late macroscopic lesions (5 and 13 months post-inoculation [p.i.], respectively) by the analysis of peritoneal lavage cells and footpad (FP) histology. The FP of mice were inoculated with 1 × 106 fungi (viability index of 41%). At 5 and 13 months p.i., the granuloma mainly consisted of macrophages and multinucleated giant cells, but a larger number of neutrophils was observed at 5 months and lymphocytes at 13 months. The number of fungi in the FP and fungal viability were 1.8 ± 1.1 × 106 fungi/ml and 38.5% at 5 months p.i. and 30.8 ± 11.7 × 106 fungi/ml and 9% at 13 months (P < .05). Higher production of H2O2, O2−, IL-10, and TNF-α were observed at 13 months (P < .05), but there was no significant difference in the production of NO, IL-2, IL-4, IL-12 and IFN-γ. The results showed significant differences between early and late lesions and support the use of BALB/c mice for evaluation of the different phases of infection


Assuntos
Animais , Feminino , Camundongos Endogâmicos BALB C , Citocinas/metabolismo , Fungos/crescimento & desenvolvimento , Granuloma/patologia , Leucócitos/imunologia , Seguimentos , Óxido Nítrico/metabolismo , Histocitoquímica , Lavagem Peritoneal , Lobomicose/patologia , Modelos Animais de Doenças , Pé/patologia , Técnicas Citológicas
10.
Appl Environ Microbiol ; 78(6): 1813-9, 2012 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-22247164

RESUMO

The fungal microbiota of bloomy-rind cheeses, such as Camembert, forms a complex ecosystem that has not been well studied, and its monitoring during the ripening period remains a challenge. One limitation of enumerating yeasts and molds on traditional agar media is that hyphae are multicellular structures, and colonies on a petri dish rarely develop from single cells. In addition, fungi tend to rapidly invade agar surfaces, covering small yeast colonies and resulting in an underestimation of their number. In this study, we developed a real-time quantitative PCR (qPCR) method using TaqMan probes to quantify a mixed fungal community containing the most common dairy yeasts and molds: Penicillium camemberti, Geotrichum candidum, Debaryomyces hansenii, and Kluyveromyces lactis on soft-cheese model curds (SCMC). The qPCR method was optimized and validated on pure cultures and used to evaluate the growth dynamics of a ripening culture containing P. camemberti, G. candidum, and K. lactis on the surface of the SCMC during a 31-day ripening period. The results showed that P. camemberti and G. candidum quickly dominated the ecosystem, while K. lactis remained less abundant. When added to this ecosystem, D. hansenii completely inhibited the growth of K. lactis in addition to reducing the growth of the other fungi. This result was confirmed by the decrease in the mycelium biomass on SCMC. This study compares culture-dependent and qPCR methods to successfully quantify complex fungal microbiota on a model curd simulating Camembert-type cheese.


Assuntos
Biota , Queijo/microbiologia , Fungos/classificação , Fungos/crescimento & desenvolvimento , Micélio/crescimento & desenvolvimento , Biomassa , Contagem de Colônia Microbiana/métodos , Meios de Cultura , Fungos/genética , Reação em Cadeia da Polimerase em Tempo Real/métodos
11.
Prikl Biokhim Mikrobiol ; 47(3): 291-6, 2011.
Artigo em Russo | MEDLINE | ID: mdl-21790028

RESUMO

Antistress effect of extracellular peptides on UV irradiated yeast of different phylogenetic groups was studied. Yeast from different ecotopes and taxonomic groups exposed to UV radiation of a lethal intensity showed a protective effect and reactivating effect with participation of extracellular peptides. The highest protective activity was found in peptide reactivation factors (RFs) of bakery yeast-Saccharomyces cerevisiae, Kluyveromyces fragilis, and Candida utilis; the highest reactivating activity was exhibited by factors of the above-mentioned cultures and Debariomyces hansenii. Cross-protective and reactivating effects of RFs of yeast belonging to different taxonomic groups were demonstrated. Cross-protection increased two to three times after preexposure of reactivation factors to UV light (activation) in contrast to their reactivating effect.


Assuntos
Líquido Extracelular/metabolismo , Fungos/efeitos da radiação , Peptídeos/farmacologia , Protetores contra Radiação/farmacologia , Contagem de Colônia Microbiana , Fungos/crescimento & desenvolvimento , Fungos/metabolismo , Peptídeos/metabolismo , Protetores contra Radiação/metabolismo , Estresse Fisiológico , Simbiose/efeitos da radiação , Raios Ultravioleta/efeitos adversos
12.
Chemosphere ; 75(7): 872-7, 2009 May.
Artigo em Inglês | MEDLINE | ID: mdl-19230952

RESUMO

Calcium cyanamide (CaCN(2)) has been one of the potential candidates as soil disinfectant since the restriction of methyl bromide in soil fumigation due to its ecological risk. However, little information is available on effects of CaCN(2) on soil microbial community. In this study, the soil microbial communities and the fate of pathogen Fusarium oxysporum (Schlechtend, Fr) f. sp. cucumberinum (Owen) Snyder and Hansen (F.O. f. sp. cucumberinum) in response to CaCN(2) treatment was evaluated. F.O. f. sp. cucumberinum population in soil treated with CaCN(2) at rates of 80 and 200 gm(-2) was suppressed by 88.7 and 92.2% after 15 d of CaCN(2) application. Bacterial, fungal, and actinomycete populations were also greatly decreased after 3 d of CaCN(2) application, but they recovered to the control level by 15 d. The variation in functional diversity of soil microbes characterized by principal component analysis, diversity and evenness indices based on Biolog data followed a similar trend. Meanwhile, the band number from the DGGE of soil 16S rDNA fragments increased from 9 for the non-CaCN(2)-treated soil to 10 or 12 after different rates of CaCN(2) application at 15 d, indicating the increase of abundant rDNA types in the community. The results suggest that CaCN(2) application had only a short-term and transitory impact on the indigenous soil microbial community in contrast to the long-term suppression of the F.O. f. sp. cucumberinum population. It is feasible to reduce Fusarium wilt without significant impact on microbial community by application of CaCN(2) at reasonable doses.


Assuntos
Cianamida/farmacologia , Fusarium/efeitos dos fármacos , Microbiologia do Solo , Actinomycetales/efeitos dos fármacos , Actinomycetales/crescimento & desenvolvimento , Antibiose , Bactérias/efeitos dos fármacos , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Biodiversidade , DNA Ribossômico/metabolismo , Ecossistema , Eletroforese em Gel de Poliacrilamida , Fungos/efeitos dos fármacos , Fungos/crescimento & desenvolvimento , RNA Ribossômico 16S/genética , Fatores de Tempo
13.
Appl Environ Microbiol ; 74(1): 172-81, 2008 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-17981942

RESUMO

The interactions that occur during the ripening of smear cheeses are not well understood. Yeast-yeast interactions and yeast-bacterium interactions were investigated within a microbial community composed of three yeasts and six bacteria found in cheese. The growth dynamics of this community was precisely described during the ripening of a model cheese, and the Lotka-Volterra model was used to evaluate species interactions. Subsequently, the effects on ecosystem functioning of yeast omissions in the microbial community were evaluated. It was found both in the Lotka-Volterra model and in the omission study that negative interactions occurred between yeasts. Yarrowia lipolytica inhibited mycelial expansion of Geotrichum candidum, whereas Y. lipolytica and G. candidum inhibited Debaryomyces hansenii cell viability during the stationary phase. However, the mechanisms involved in these interactions remain unclear. It was also shown that yeast-bacterium interactions played a significant role in the establishment of this multispecies ecosystem on the cheese surface. Yeasts were key species in bacterial development, but their influences on the bacteria differed. It appeared that the growth of Arthrobacter arilaitensis or Hafnia alvei relied less on a specific yeast function because these species dominated the bacterial flora, regardless of which yeasts were present in the ecosystem. For other bacteria, such as Leucobacter sp. or Brevibacterium aurantiacum, growth relied on a specific yeast, i.e., G. candidum. Furthermore, B. aurantiacum, Corynebacterium casei, and Staphylococcus xylosus showed reduced colonization capacities in comparison with the other bacteria in this model cheese. Bacterium-bacterium interactions could not be clearly identified.


Assuntos
Antibiose/fisiologia , Bactérias/crescimento & desenvolvimento , Queijo/microbiologia , Ecossistema , Fungos/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Fungos/isolamento & purificação , Viabilidade Microbiana , Micélio/crescimento & desenvolvimento
14.
Int J Food Microbiol ; 101(3): 293-302, 2005 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-15925712

RESUMO

In the present work, we have analysed the yeast microbiota present in a manufacturing plant of candied fruits and nougats. Four yeasts species (Zygosaccharomyces bailii, Zygosaccharomyces rouxii, Sporobolomyces roseus, and Debaryomyces hansenii) and a filamentous fungi (Nectria mauriiticola) were identified according to restriction analysis of 5.8S-ITS rDNA. These identifications were subsequently confirmed by sequencing the D1/D2 domain of the 26S rRNA gene. Z. rouxii and Z. bailii were isolated at high frequency along the whole manufacturing process. Since food alteration by Z. bailii and Z. rouxii is the cause of important economic losses for the food industry, there is a need for differentiating yeasts at the strain level as an essential part of quality control programs in this industry. For this purpose, we have tested the performance of three molecular techniques (RFLP mtDNA, RAPD-PCR, and microsatellite with (GAC)5 and (GTG)5 primers) to differentiate strains belonging to these two Zygosaccharomyces species. Those techniques with the best discriminatory power were applied to differentiate Zygosaccharomyces species isolates. The results of this analysis indicate that one strain of Z. bailii and two strains of Z. rouxii were involved in the spoilage of candied fruits. Moreover, the Z. bailii strain was also present in the spoiled nougat, hence being responsible of this alteration.


Assuntos
Doces/microbiologia , DNA Fúngico/análise , Contaminação de Alimentos/análise , Microbiologia de Alimentos , Fungos/isolamento & purificação , Leveduras/isolamento & purificação , Fungos/crescimento & desenvolvimento , Reação em Cadeia da Polimerase/métodos , Técnica de Amplificação ao Acaso de DNA Polimórfico/métodos , Mapeamento por Restrição , Leveduras/crescimento & desenvolvimento
15.
FEMS Yeast Res ; 5(3): 253-61, 2004 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-15556087

RESUMO

Temperature gradient gel electrophoresis (TGGE) was employed for the assessment of yeast diversity in the estuary of the Tagus river (Portugal). The molecular detection of yeasts was carried out directly from water samples and, in parallel, a cultivation approach by means of an enrichment step was employed. A nested PCR was employed to obtain a fungal amplicon containing the D2 domain of the 26S rRNA gene. For identification the TGGE bands were extracted, re-amplified, and sequenced. Fourteen fungal taxa were detected and all except one were yeasts. Most yeast sequences corresponded to members of the Ascomycota and only three belonged to the Basidiomycota. Five yeasts (four ascomycetes and one basidiomycete) could not be identified to the species level due to the uniqueness of their sequences. The number of species detected after enrichment was higher than the number of taxa found using the direct detection method. This suggests that some yeast populations are present in densities that are below the detection threshold of the method. With respect to the analysis of the yeast community structure, our results indicate that the dominant populations belong to Debaryomyces hansenii, Rhodotorula mucilaginosa, Cryptococcus longus, and to an uncultured basidiomycetous yeast phylogenetically close to Cr. longus. The combined analysis of direct detection and cultivation approaches indicates a similar community structure at the two sampled sites since nine species were present at both localities.


Assuntos
Ecossistema , Fungos/fisiologia , Microbiologia da Água , Sequência de Bases , Teorema de Bayes , DNA Fúngico/química , DNA Fúngico/genética , Eletroforese em Gel de Poliacrilamida , Fungos/genética , Fungos/crescimento & desenvolvimento , Variação Genética , Filogenia , Reação em Cadeia da Polimerase , Portugal , RNA Ribossômico/química , RNA Ribossômico/genética , Rios
16.
FEMS Yeast Res ; 4(8): 865-77, 2004 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-15450194

RESUMO

The performance of denaturing gradient gel electrophoresis (DGGE) for analysing yeasts associated with wine grapes was compared with cultural isolation on malt extract agar (MEA). After optimisation of PCR and electrophoretic conditions, the lower limit of yeast detection by PCR-DGGE was 10(2) cfuml(-1), although this value was affected by culture age and the relative populations of the species in mixed culture. In mixed yeast populations, PCR-DGGE detected species present at 10-100-fold less than other species but not when the ratio exceeded 100-fold. Aureobasidium pullulans was the main species isolated from immature, mature, and both damaged and undamaged grapes. It was not detected by PCR-DGGE when present at populations less than 10(3) cfug(-1). When approaching maturity, damaged grapes gave a predominance of Metschnikowia and Hanseniaspora species (10(5)-10(7) cfug(-1)), all detectable using PCR-DGGE. However, various species of Rhodotorula, Rhodosporidium and Cryptococcus were not detected by this method, even when populations were as high as 10(4) cfug(-1). PCR -DGGE was less sensitive than culture on MEA for determining the yeast ecology of grapes and could not reliably detect species present at populations less than 10(4) cfug(-1). However, this method detected a greater diversity of species than agar plating.


Assuntos
Eletroforese em Gel de Poliacrilamida/métodos , Vinho/microbiologia , Leveduras/fisiologia , DNA Fúngico/genética , Ecologia , Fungos/crescimento & desenvolvimento , Fungos/fisiologia , Reação em Cadeia da Polimerase , Especificidade da Espécie , Vitis , Leveduras/crescimento & desenvolvimento
17.
Int J Food Microbiol ; 86(1-2): 11-22, 2003 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-12892919

RESUMO

Wine is the product of complex interactions between fungi, yeasts and bacteria that commence in the vineyard and continue throughout the fermentation process until packaging. Although grape cultivar and cultivation provide the foundations of wine flavour, microorganisms, especially yeasts, impact on the subtlety and individuality of the flavour response. Consequently, it is important to identify and understand the ecological interactions that occur between the different microbial groups, species and strains. These interactions encompass yeast-yeast, yeast-filamentous fungi and yeast-bacteria responses. The surface of healthy grapes has a predominance of Aureobasidium pullulans, Metschnikowia, Hanseniaspora (Kloeckera), Cryptococcus and Rhodotorula species depending on stage of maturity. This microflora moderates the growth of spoilage and mycotoxigenic fungi on grapes, the species and strains of yeasts that contribute to alcoholic fermentation, and the bacteria that contribute to malolactic fermentation. Damaged grapes have increased populations of lactic and acetic acid bacteria that impact on yeasts during alcoholic fermentation. Alcoholic fermentation is characterised by the successional growth of various yeast species and strains, where yeast-yeast interactions determine the ecology. Through yeast-bacterial interactions, this ecology can determine progression of the malolactic fermentation, and potential growth of spoilage bacteria in the final product. The mechanisms by which one species/strain impacts on another in grape-wine ecosystems include: production of lytic enzymes, ethanol, sulphur dioxide and killer toxin/bacteriocin like peptides; nutrient depletion including removal of oxygen, and production of carbon dioxide; and release of cell autolytic components. Cell-cell communication through quorum sensing molecules needs investigation.


Assuntos
Microbiologia de Alimentos , Paladar , Vinho/microbiologia , Leveduras/fisiologia , Bactérias/crescimento & desenvolvimento , Técnicas de Cocultura , Etanol , Fermentação , Fungos/crescimento & desenvolvimento , Fungos/fisiologia , Concentração de Íons de Hidrogênio , Leveduras/crescimento & desenvolvimento
18.
Int J Food Microbiol ; 57(3): 193-9, 2000 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-10868680

RESUMO

The starter culture Penicillium roqueforti, undesired cultures Penicillium caseifulvum and Geotrichum candidum and the potential starter culture Debaryomyces hansenii were examined for their growth and interactions at environmental conditions similar to the Danish blue cheese Danablu. The combined effect of low oxygen (0.3%) and high level of carbon dioxide (25%) at 4% NaCl w/v (a(w) 0.97) and pH 4.5 and 6.5 on radial growth was examined on a cheese medium at 10 degrees C. P. roqueforti and G. candidum were well adapted to growth at low levels of oxygen and high levels of carbon dioxide but G. candidum was not able to grow in the presence of 4% NaCl (w/v). Growth of P. caseifulvum was strongly inhibited at atmospheric conditions comprising 25% carbon dioxide, especially in combination with 0.3% oxygen. Generally D. hansenii showed strong growth at all environmental conditions examined, except at 0.3% oxygen combined with 25% carbon dioxide and 4% NaCl (w/v). Growth and sporulation of P. roqueforti was highly affected in the presence of G. candidum at 25% carbon dioxide irrespective of levels of oxygen and NaCl in the cheese media. P. caseifulvum caused a pronounced inhibitory effect towards growth of P. roqueforti and D. hansenii at 21% oxygen. D. hansenii caused weak inhibition of P. roqueforti at 21% oxygen, while positive interactions between the two species were indicated at 25% carbon dioxide and 0.3% oxygen.


Assuntos
Dióxido de Carbono/farmacologia , Queijo/microbiologia , Microbiologia de Alimentos , Fungos/crescimento & desenvolvimento , Oxigênio/farmacologia , Cloreto de Sódio/farmacologia , Atmosfera , Geotrichum/crescimento & desenvolvimento , Concentração de Íons de Hidrogênio , Penicillium/crescimento & desenvolvimento , Saccharomycetales/crescimento & desenvolvimento
20.
Can J Microbiol ; 33(4): 327-30, 1987 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-3594310

RESUMO

Pyrenocine A, a phytotoxin produced by Pyrenochaeta terrestris (Hansen) Gorenz, Walker and Larson, possesses general antibiotic activity against plants, fungi, and bacteria. Effective doses for 50% inhibition (ED50s) are 4 micrograms/mL for onion seedling elongation; 14, 20, 20, and 25 micrograms/mL for the germination of asexual spores of Fusarium oxysporum f. sp. cepae, Fusarium solani f. sp. pisi, Mucor hiemalis, and Rhizopus stolonifer, respectively. Pyrenocine A also inhibits the linear mycelial growth of both P. terrestris and F. oxysporum with ED50s calculated as 77 and 54 micrograms/mL, respectively. Gram-positive bacteria are more susceptible to pyrenocine A than Gram-negative bacteria. ED50s are estimated as 30, 45, and 200 micrograms/mL for the inhibition of growth of Bacillus subtilis, Staphylococcus aureus, and Escherichia coli, respectively, with Pseudomonas aeruginosa resistant to those concentrations tested. Pyrenocine A acts primarily as a biostatic rather than a biocidal agent with all organisms tested showing some degree of recovery when released from pyrenocine A. Pyrenocines B and C show little antibiotic activity in the bioassays performed.


Assuntos
Antibacterianos/farmacologia , Fungos , Piranos/farmacologia , Pironas/farmacologia , Fungos/efeitos dos fármacos , Fungos/crescimento & desenvolvimento , Bactérias Gram-Negativas/efeitos dos fármacos , Bactérias Gram-Positivas/efeitos dos fármacos , Testes de Sensibilidade Microbiana , Plantas/efeitos dos fármacos , Pironas/isolamento & purificação , Esporos Fúngicos/efeitos dos fármacos
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